Advances in Internet technologies have allowed life science researchers to reach beyond the lab-centric research paradigm to create distributed collaborations. Of the existing technologies that ...

This project involves comparing three popular sequence alignment methods—BLAST, FASTA, and Smith-Waterman—by running alignment experiments on various genomic and protein datasets. The goal is to ...

The FASTA programs provide a comprehensive set of rapid similarity searching tools (fasta36, fastx36, tfastx36, fasty36, tfasty36), similar to those provided by the BLAST package, as well as programs ...

Five algorithms for sonifying proteins and protein Multiple Sequence Alignments (MSAs). These scripts take FASTA-format protein sequences or FASTA-format protein Multiple Sequence Alignments and ...

Abstract: Protein sequence alignment is basic operation mostly used in protein sequence analysis. The most optimal algorithm used in sequence alignment is based on the dynamic programming method.